| /* Copyright (c) 2012 Massachusetts Institute of Technology |
| * |
| * Permission is hereby granted, free of charge, to any person obtaining a copy |
| * of this software and associated documentation files (the "Software"), to deal |
| * in the Software without restriction, including without limitation the rights |
| * to use, copy, modify, merge, publish, distribute, sublicense, and/or sell |
| * copies of the Software, and to permit persons to whom the Software is |
| * furnished to do so, subject to the following conditions: |
| * |
| * The above copyright notice and this permission notice shall be included in |
| * all copies or substantial portions of the Software. |
| * |
| * THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR |
| * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, |
| * FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE |
| * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER |
| * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, |
| * OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN |
| * THE SOFTWARE. |
| */ |
| |
| #include "model/TransitionInfo.h" |
| |
| namespace DSENT |
| { |
| TransitionInfo::TransitionInfo() |
| : m_number_transitions_00_(0.25), m_number_transitions_01_(0.25), |
| m_number_transitions_11_(0.25), m_frequency_multiplier_(1.0) |
| { |
| update(); |
| } |
| |
| TransitionInfo::TransitionInfo(double number_transitions_00_, double number_transitions_01_, |
| double number_transitions_11_) |
| : m_number_transitions_00_(number_transitions_00_), m_number_transitions_01_(number_transitions_01_), |
| m_number_transitions_11_(number_transitions_11_) |
| { |
| m_frequency_multiplier_ = m_number_transitions_00_ + 2.0 * m_number_transitions_01_ + m_number_transitions_11_; |
| update(); |
| } |
| |
| TransitionInfo::~TransitionInfo() |
| {} |
| |
| void TransitionInfo::update() |
| { |
| ASSERT(m_number_transitions_00_ >= 0.0, "[Error] Number of 0->0 transitions (" + |
| (String)m_number_transitions_00_ + ") must be >= 0.0!"); |
| ASSERT(m_number_transitions_01_ >= 0.0, "[Error] Number of 0->1 transitions (" + |
| (String)m_number_transitions_01_ + ") must be >= 0.0!"); |
| ASSERT(m_number_transitions_11_ >= 0.0, "[Error] Number of 1->1 transitions (" + (String)m_number_transitions_11_ + ") must be >= 0.0!"); |
| |
| m_probability_1_ = (m_number_transitions_01_ + m_number_transitions_11_) / m_frequency_multiplier_; |
| m_probability_0_ = 1.0 - m_probability_1_; |
| return; |
| } |
| |
| TransitionInfo TransitionInfo::scaleFrequencyMultiplier(double frequency_multiplier_) const |
| { |
| // A short cut if frequency_multiplier_ == m_frequency_multiplier_ to avoid excess calculations |
| if(frequency_multiplier_ == m_frequency_multiplier_) |
| { |
| return TransitionInfo(m_number_transitions_00_, m_number_transitions_01_, m_number_transitions_11_); |
| } |
| else if (frequency_multiplier_ > m_frequency_multiplier_) |
| { |
| double freq_ratio = frequency_multiplier_ / m_frequency_multiplier_; |
| double diff_num_trans_01 = m_number_transitions_01_ * (freq_ratio - 1.0); |
| double norm_num_trans_00 = m_number_transitions_00_ * freq_ratio + diff_num_trans_01; |
| double norm_num_trans_01 = m_number_transitions_01_; |
| double norm_num_trans_11 = m_number_transitions_11_ * freq_ratio + diff_num_trans_01; |
| |
| return TransitionInfo(norm_num_trans_00, norm_num_trans_01, norm_num_trans_11); |
| } |
| else |
| { |
| ASSERT(false, "[Error] Cannot scale to frequency multiplier (" + (String) frequency_multiplier_ + |
| ") since current frequency multiplier (" + (String) m_frequency_multiplier_ + ") is bigger!"); |
| } |
| } |
| |
| void TransitionInfo::print(std::ostream& ost_) const |
| { |
| ost_ << "[" << m_number_transitions_00_ << ", " << m_number_transitions_01_ << ", " << m_number_transitions_11_ << "]"; |
| ost_ << " [" << m_number_transitions_00_ / m_frequency_multiplier_; |
| ost_ << ", " << m_number_transitions_01_*2.0 / m_frequency_multiplier_; |
| ost_ << ", " << m_number_transitions_11_ / m_frequency_multiplier_ << "]" << endl; |
| return; |
| } |
| } // namespace DSENT |
| |